Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF40O75150 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF40O75150 AC105020.1-201ENST00000435356 2205 ntBASIC18.79■□□□□ 0.6
RNF40O75150 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF40O75150 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF40O75150 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF40O75150 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF40O75150 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF40O75150 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF40O75150 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF40O75150 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF40O75150 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF40O75150 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF40O75150 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RNF40O75150 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
RNF40O75150 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF40O75150 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF40O75150 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF40O75150 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF40O75150 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF40O75150 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF40O75150 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF40O75150 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF40O75150 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.78■□□□□ 0.6
RNF40O75150 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
RNF40O75150 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF40O75150 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF40O75150 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RNF40O75150 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF40O75150 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF40O75150 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF40O75150 KRT16P4-201ENST00000453883 522 ntBASIC18.78■□□□□ 0.6
RNF40O75150 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
RNF40O75150 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF40O75150 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF40O75150 AC024563.2-201ENST00000603282 481 ntBASIC18.78■□□□□ 0.6
RNF40O75150 AL121912.1-201ENST00000603683 238 ntBASIC18.78■□□□□ 0.6
RNF40O75150 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF40O75150 AC124864.1-201ENST00000623408 392 ntBASIC18.78■□□□□ 0.6
RNF40O75150 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF40O75150 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF40O75150 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF40O75150 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF40O75150 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF40O75150 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF40O75150 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF40O75150 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF40O75150 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RNF40O75150 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF40O75150 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF40O75150 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF40O75150 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF40O75150 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF40O75150 DOC2GP-204ENST00000639052 2548 ntBASIC18.77■□□□□ 0.6
RNF40O75150 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF40O75150 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF40O75150 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF40O75150 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF40O75150 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF40O75150 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF40O75150 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF40O75150 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RNF40O75150 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF40O75150 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF40O75150 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF40O75150 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF40O75150 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF40O75150 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RNF40O75150 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RNF40O75150 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF40O75150 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF40O75150 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF40O75150 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
RNF40O75150 AC106795.1-205ENST00000512851 1056 ntBASIC18.77■□□□□ 0.6
RNF40O75150 GUSBP12-201ENST00000513727 720 ntBASIC18.77■□□□□ 0.6
RNF40O75150 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.77■□□□□ 0.6
RNF40O75150 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.77■□□□□ 0.6
RNF40O75150 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF40O75150 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.77■□□□□ 0.6
RNF40O75150 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.77■□□□□ 0.6
RNF40O75150 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
RNF40O75150 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF40O75150 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RNF40O75150 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF40O75150 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF40O75150 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF40O75150 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF40O75150 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF40O75150 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.77■□□□□ 0.59
RNF40O75150 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.77■□□□□ 0.59
RNF40O75150 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF40O75150 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF40O75150 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF40O75150 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF40O75150 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF40O75150 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF40O75150 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF40O75150 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF40O75150 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF40O75150 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms