Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.27■□□□□ 0.36
KLHL41O60662 NPAP1P7-201ENST00000613027 823 ntBASIC17.27■□□□□ 0.36
KLHL41O60662 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.27■□□□□ 0.36
KLHL41O60662 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.27■□□□□ 0.36
KLHL41O60662 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KLHL41O60662 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
KLHL41O60662 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.27■□□□□ 0.35
KLHL41O60662 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
KLHL41O60662 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
KLHL41O60662 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KLHL41O60662 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KLHL41O60662 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KLHL41O60662 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KLHL41O60662 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL41O60662 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL41O60662 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL41O60662 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL41O60662 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHL41O60662 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL41O60662 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.26■□□□□ 0.35
KLHL41O60662 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.26■□□□□ 0.35
KLHL41O60662 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL41O60662 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHL41O60662 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.26■□□□□ 0.35
KLHL41O60662 SEC1P-202ENST00000473944 940 ntBASIC17.26■□□□□ 0.35
KLHL41O60662 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHL41O60662 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHL41O60662 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.26■□□□□ 0.35
KLHL41O60662 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.26■□□□□ 0.35
KLHL41O60662 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHL41O60662 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHL41O60662 AL136038.4-201ENST00000603606 1261 ntBASIC17.26■□□□□ 0.35
KLHL41O60662 AC116407.2-201ENST00000613639 860 ntBASIC17.26■□□□□ 0.35
KLHL41O60662 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
KLHL41O60662 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL41O60662 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.26■□□□□ 0.35
KLHL41O60662 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL41O60662 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL41O60662 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
KLHL41O60662 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
KLHL41O60662 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL41O60662 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KLHL41O60662 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL41O60662 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.26■□□□□ 0.35
KLHL41O60662 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL41O60662 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL41O60662 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL41O60662 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL41O60662 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.26■□□□□ 0.35
KLHL41O60662 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KLHL41O60662 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
KLHL41O60662 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.25■□□□□ 0.35
KLHL41O60662 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL41O60662 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
KLHL41O60662 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.25■□□□□ 0.35
KLHL41O60662 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL41O60662 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
KLHL41O60662 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL41O60662 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.25■□□□□ 0.35
KLHL41O60662 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL41O60662 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
KLHL41O60662 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL41O60662 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
KLHL41O60662 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL41O60662 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
KLHL41O60662 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.25■□□□□ 0.35
KLHL41O60662 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
KLHL41O60662 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL41O60662 CHCHD2P8-201ENST00000429873 447 ntBASIC17.25■□□□□ 0.35
KLHL41O60662 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL41O60662 HLA-F-220ENST00000434407 884 ntBASIC17.25■□□□□ 0.35
KLHL41O60662 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
KLHL41O60662 SPDYE13P-201ENST00000445314 798 ntBASIC17.25■□□□□ 0.35
KLHL41O60662 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
KLHL41O60662 AC092597.1-201ENST00000487352 616 ntBASIC17.25■□□□□ 0.35
KLHL41O60662 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.25■□□□□ 0.35
KLHL41O60662 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.25■□□□□ 0.35
KLHL41O60662 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
KLHL41O60662 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.25■□□□□ 0.35
KLHL41O60662 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
KLHL41O60662 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
KLHL41O60662 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.25■□□□□ 0.35
KLHL41O60662 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL41O60662 LINC01711-201ENST00000598340 967 ntBASIC17.25■□□□□ 0.35
KLHL41O60662 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL41O60662 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.25■□□□□ 0.35
KLHL41O60662 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.25■□□□□ 0.35
KLHL41O60662 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL41O60662 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL41O60662 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.25■□□□□ 0.35
KLHL41O60662 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL41O60662 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL41O60662 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL41O60662 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KLHL41O60662 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KLHL41O60662 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms