Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRICKLE3O43900 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRICKLE3O43900 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRICKLE3O43900 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRICKLE3O43900 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRICKLE3O43900 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 ELK2BP-201ENST00000415014 1224 ntBASIC16.64■□□□□ 0.25
PRICKLE3O43900 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRICKLE3O43900 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 AC023511.2-201ENST00000618803 211 ntBASIC16.64■□□□□ 0.25
PRICKLE3O43900 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRICKLE3O43900 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRICKLE3O43900 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRICKLE3O43900 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRICKLE3O43900 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PRICKLE3O43900 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRICKLE3O43900 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PRICKLE3O43900 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
PRICKLE3O43900 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE3O43900 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PRICKLE3O43900 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PRICKLE3O43900 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PRICKLE3O43900 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.63■□□□□ 0.25
PRICKLE3O43900 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
PRICKLE3O43900 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.63■□□□□ 0.25
PRICKLE3O43900 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE3O43900 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.63■□□□□ 0.25
PRICKLE3O43900 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PRICKLE3O43900 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE3O43900 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE3O43900 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PRICKLE3O43900 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE3O43900 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE3O43900 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE3O43900 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE3O43900 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.63■□□□□ 0.25
PRICKLE3O43900 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.63■□□□□ 0.25
PRICKLE3O43900 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE3O43900 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.63■□□□□ 0.25
PRICKLE3O43900 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.63■□□□□ 0.25
PRICKLE3O43900 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.63■□□□□ 0.25
PRICKLE3O43900 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
PRICKLE3O43900 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE3O43900 AC139713.2-201ENST00000641328 2723 ntBASIC16.63■□□□□ 0.25
PRICKLE3O43900 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE3O43900 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE3O43900 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE3O43900 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE3O43900 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE3O43900 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE3O43900 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE3O43900 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRICKLE3O43900 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE3O43900 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PRICKLE3O43900 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.62■□□□□ 0.25
PRICKLE3O43900 AC093525.9-201ENST00000624961 1746 ntBASIC16.62■□□□□ 0.25
PRICKLE3O43900 LTB4R2-202ENST00000528054 3092 ntBASIC16.62■□□□□ 0.25
PRICKLE3O43900 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.62■□□□□ 0.25
PRICKLE3O43900 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE3O43900 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE3O43900 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE3O43900 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE3O43900 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PRICKLE3O43900 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PRICKLE3O43900 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE3O43900 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PRICKLE3O43900 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.62■□□□□ 0.25
PRICKLE3O43900 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PRICKLE3O43900 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE3O43900 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.62■□□□□ 0.25
PRICKLE3O43900 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE3O43900 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.62■□□□□ 0.25
PRICKLE3O43900 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.62■□□□□ 0.25
PRICKLE3O43900 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.62■□□□□ 0.25
PRICKLE3O43900 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE3O43900 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.62■□□□□ 0.25
PRICKLE3O43900 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRICKLE3O43900 IGHV3-22-201ENST00000520721 359 ntBASIC16.62■□□□□ 0.25
PRICKLE3O43900 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.62■□□□□ 0.25
PRICKLE3O43900 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.62■□□□□ 0.25
PRICKLE3O43900 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.62■□□□□ 0.25
PRICKLE3O43900 AL356488.2-201ENST00000602755 427 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms