Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 GPS2P2-201ENST00000430745 888 ntBASIC16.3■□□□□ 0.2
NTN3O00634 CNN2P2-201ENST00000443536 909 ntBASIC16.3■□□□□ 0.2
NTN3O00634 CNN2P3-201ENST00000450201 906 ntBASIC16.3■□□□□ 0.2
NTN3O00634 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.3■□□□□ 0.2
NTN3O00634 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NTN3O00634 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.3■□□□□ 0.2
NTN3O00634 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NTN3O00634 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.3■□□□□ 0.2
NTN3O00634 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.3■□□□□ 0.2
NTN3O00634 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
NTN3O00634 AC051619.7-201ENST00000568314 623 ntBASIC16.3■□□□□ 0.2
NTN3O00634 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.3■□□□□ 0.2
NTN3O00634 AL009183.1-201ENST00000603760 355 ntBASIC16.3■□□□□ 0.2
NTN3O00634 AL136317.3-201ENST00000618497 906 ntBASIC16.3■□□□□ 0.2
NTN3O00634 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NTN3O00634 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.3■□□□□ 0.2
NTN3O00634 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
NTN3O00634 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.3■□□□□ 0.2
NTN3O00634 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NTN3O00634 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NTN3O00634 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NTN3O00634 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
NTN3O00634 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NTN3O00634 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NTN3O00634 AC012569.1-201ENST00000591191 1524 ntBASIC16.29■□□□□ 0.2
NTN3O00634 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NTN3O00634 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NTN3O00634 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.29■□□□□ 0.2
NTN3O00634 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.29■□□□□ 0.2
NTN3O00634 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.29■□□□□ 0.2
NTN3O00634 SLC25A6P5-201ENST00000435663 894 ntBASIC16.29■□□□□ 0.2
NTN3O00634 SPCS2P4-201ENST00000436160 681 ntBASIC16.29■□□□□ 0.2
NTN3O00634 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 COX20P2-201ENST00000452636 358 ntBASIC16.29■□□□□ 0.2
NTN3O00634 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.29■□□□□ 0.2
NTN3O00634 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.29■□□□□ 0.2
NTN3O00634 AC109635.5-201ENST00000533593 962 ntBASIC16.29■□□□□ 0.2
NTN3O00634 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.29■□□□□ 0.2
NTN3O00634 DUX4L27-201ENST00000554796 1261 ntBASIC16.29■□□□□ 0.2
NTN3O00634 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.29■□□□□ 0.2
NTN3O00634 LINC01225-203ENST00000563550 1244 ntBASIC16.29■□□□□ 0.2
NTN3O00634 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.29■□□□□ 0.2
NTN3O00634 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.29■□□□□ 0.2
NTN3O00634 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.29■□□□□ 0.2
NTN3O00634 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.29■□□□□ 0.2
NTN3O00634 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.29■□□□□ 0.2
NTN3O00634 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.29■□□□□ 0.2
NTN3O00634 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NTN3O00634 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NTN3O00634 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NTN3O00634 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NTN3O00634 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NTN3O00634 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NTN3O00634 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.28■□□□□ 0.2
NTN3O00634 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NTN3O00634 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NTN3O00634 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NTN3O00634 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NTN3O00634 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NTN3O00634 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.28■□□□□ 0.2
NTN3O00634 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NTN3O00634 RNA5SP421-201ENST00000516864 134 ntBASIC16.28■□□□□ 0.2
NTN3O00634 AC069262.1-201ENST00000539058 672 ntBASIC16.28■□□□□ 0.2
NTN3O00634 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NTN3O00634 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NTN3O00634 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
NTN3O00634 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NTN3O00634 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
NTN3O00634 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NTN3O00634 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NTN3O00634 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.28■□□□□ 0.2
NTN3O00634 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NTN3O00634 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.28■□□□□ 0.2
NTN3O00634 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NTN3O00634 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NTN3O00634 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NTN3O00634 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.27■□□□□ 0.2
NTN3O00634 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NTN3O00634 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
NTN3O00634 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.27■□□□□ 0.2
NTN3O00634 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NTN3O00634 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms