Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.37■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.37■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 MIR3687-2-201ENST00000577708 61 ntBASIC17.37■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.37■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 MIR3687-1-201ENST00000614492 61 ntBASIC17.37■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.37■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 AL355312.1-201ENST00000407115 2176 ntBASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 YBX2P1-201ENST00000394192 760 ntBASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 AC002310.6-201ENST00000624451 1377 ntBASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.36■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 AC023274.1-201ENST00000418278 595 ntBASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 UPF3AP3-201ENST00000420996 769 ntBASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 KRT18P2-201ENST00000447938 1258 ntBASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 AC010327.4-202ENST00000591484 748 ntBASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 MTDHP5-201ENST00000598980 586 ntBASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
C1QTNF3-AMACRE9PGA6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms