Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 BX276092.7-203ENST00000637198 1536 ntBASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 TP73-AS1-210ENST00000637775 1455 ntBASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PRAMEF25A6NGN4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 FLJ38576-201ENST00000623820 2459 ntBASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 AL121772.3-201ENST00000610840 674 ntBASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PRAMEF25A6NGN4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 AC105020.1-201ENST00000435356 2205 ntBASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 OR6D1P-202ENST00000641007 5290 ntBASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 AC007967.3-201ENST00000434308 558 ntBASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 DUSP5P1-201ENST00000441325 1139 ntBASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 AC011467.2-201ENST00000598425 242 ntBASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.27■□□□□ 0.2
PRAMEF25A6NGN4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.27■□□□□ 0.19
PRAMEF25A6NGN4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.27■□□□□ 0.19
PRAMEF25A6NGN4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PRAMEF25A6NGN4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms