Protein–RNA interactions for Protein: A2RUS2

DENND3, DENN domain-containing protein 3, humanhuman

Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3A2RUS2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DENND3A2RUS2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.2■□□□□ 0.66
DENND3A2RUS2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.2■□□□□ 0.66
DENND3A2RUS2 AC010327.4-202ENST00000591484 748 ntBASIC19.2■□□□□ 0.66
DENND3A2RUS2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.2■□□□□ 0.66
DENND3A2RUS2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
DENND3A2RUS2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DENND3A2RUS2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DENND3A2RUS2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DENND3A2RUS2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
DENND3A2RUS2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DENND3A2RUS2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DENND3A2RUS2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DENND3A2RUS2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.19■□□□□ 0.66
DENND3A2RUS2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND3A2RUS2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND3A2RUS2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND3A2RUS2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
DENND3A2RUS2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
DENND3A2RUS2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND3A2RUS2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND3A2RUS2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.19■□□□□ 0.66
DENND3A2RUS2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
DENND3A2RUS2 AC046185.3-201ENST00000623228 1824 ntBASIC19.19■□□□□ 0.66
DENND3A2RUS2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND3A2RUS2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
DENND3A2RUS2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND3A2RUS2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND3A2RUS2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND3A2RUS2 AC073621.1-201ENST00000392730 636 ntBASIC19.19■□□□□ 0.66
DENND3A2RUS2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DENND3A2RUS2 UPF3AP3-201ENST00000420996 769 ntBASIC19.19■□□□□ 0.66
DENND3A2RUS2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.19■□□□□ 0.66
DENND3A2RUS2 AC108751.1-201ENST00000490852 363 ntBASIC19.19■□□□□ 0.66
DENND3A2RUS2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.19■□□□□ 0.66
DENND3A2RUS2 MIR3687-2-201ENST00000577708 61 ntBASIC19.19■□□□□ 0.66
DENND3A2RUS2 MIR3687-1-201ENST00000614492 61 ntBASIC19.19■□□□□ 0.66
DENND3A2RUS2 AL691403.2-201ENST00000618460 490 ntBASIC19.19■□□□□ 0.66
DENND3A2RUS2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DENND3A2RUS2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
DENND3A2RUS2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND3A2RUS2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND3A2RUS2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DENND3A2RUS2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.19■□□□□ 0.66
DENND3A2RUS2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND3A2RUS2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND3A2RUS2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.18■□□□□ 0.66
DENND3A2RUS2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
DENND3A2RUS2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND3A2RUS2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND3A2RUS2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DENND3A2RUS2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND3A2RUS2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND3A2RUS2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
DENND3A2RUS2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DENND3A2RUS2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
DENND3A2RUS2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.18■□□□□ 0.66
DENND3A2RUS2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.18■□□□□ 0.66
DENND3A2RUS2 SIGLEC30P-201ENST00000455569 941 ntBASIC19.18■□□□□ 0.66
DENND3A2RUS2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.18■□□□□ 0.66
DENND3A2RUS2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND3A2RUS2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.18■□□□□ 0.66
DENND3A2RUS2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.18■□□□□ 0.66
DENND3A2RUS2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.18■□□□□ 0.66
DENND3A2RUS2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.18■□□□□ 0.66
DENND3A2RUS2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND3A2RUS2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
DENND3A2RUS2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND3A2RUS2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DENND3A2RUS2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND3A2RUS2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND3A2RUS2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
DENND3A2RUS2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND3A2RUS2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DENND3A2RUS2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DENND3A2RUS2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.17■□□□□ 0.66
DENND3A2RUS2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.17■□□□□ 0.66
DENND3A2RUS2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DENND3A2RUS2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.17■□□□□ 0.66
DENND3A2RUS2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DENND3A2RUS2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.17■□□□□ 0.66
DENND3A2RUS2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
DENND3A2RUS2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DENND3A2RUS2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.17■□□□□ 0.66
DENND3A2RUS2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
DENND3A2RUS2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DENND3A2RUS2 DNAJB3-201ENST00000446806 729 ntBASIC19.17■□□□□ 0.66
DENND3A2RUS2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.17■□□□□ 0.66
DENND3A2RUS2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.17■□□□□ 0.66
DENND3A2RUS2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.17■□□□□ 0.66
DENND3A2RUS2 AL139424.1-201ENST00000607572 797 ntBASIC19.17■□□□□ 0.66
DENND3A2RUS2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DENND3A2RUS2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.17■□□□□ 0.66
DENND3A2RUS2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.17■□□□□ 0.66
DENND3A2RUS2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DENND3A2RUS2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.17■□□□□ 0.66
DENND3A2RUS2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DENND3A2RUS2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
DENND3A2RUS2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.17■□□□□ 0.66
DENND3A2RUS2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms