Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 STARP1-201ENST00000397973 869 ntBASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 AC104390.1-201ENST00000555663 520 ntBASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP4B1Q9Y6B7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 SEC1P-202ENST00000473944 940 ntBASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 MIR3180-4-201ENST00000582223 153 ntBASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AP4B1Q9Y6B7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 AC009065.1-201ENST00000564055 1225 ntBASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
AP4B1Q9Y6B7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms