Protein–RNA interactions for Protein: Q9Y5G5

PCDHGA8, Protocadherin gamma-A8, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8Q9Y5G5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 AC105339.3-201ENST00000560043 636 ntBASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 AC012640.2-201ENST00000561606 901 ntBASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 MIR3687-2-201ENST00000577708 61 ntBASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 MIR3687-1-201ENST00000614492 61 ntBASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 AC107918.4-202ENST00000641623 219 ntBASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHGA8Q9Y5G5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PCDHGA8Q9Y5G5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGA8Q9Y5G5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGA8Q9Y5G5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGA8Q9Y5G5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHGA8Q9Y5G5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGA8Q9Y5G5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHGA8Q9Y5G5 AD000864.1-201ENST00000624076 2295 ntBASIC17.08■□□□□ 0.33
PCDHGA8Q9Y5G5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHGA8Q9Y5G5 AC141586.5-201ENST00000624546 2050 ntBASIC17.08■□□□□ 0.33
PCDHGA8Q9Y5G5 LINC00602-201ENST00000629776 2065 ntBASIC17.08■□□□□ 0.33
PCDHGA8Q9Y5G5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHGA8Q9Y5G5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGA8Q9Y5G5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA8Q9Y5G5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 GMCL1P1-201ENST00000463439 1581 ntBASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 YBX2P1-201ENST00000394192 760 ntBASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 AC010327.4-202ENST00000591484 748 ntBASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 AP001160.2-201ENST00000596071 487 ntBASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA8Q9Y5G5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms