Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 COX5BP2-201ENST00000392354 334 ntBASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 AL020989.1-201ENST00000422979 469 ntBASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 AC004706.3-202ENST00000621574 984 ntBASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 SIRPAP1-201ENST00000448467 1770 ntBASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA9Q9Y5G4 AC008894.3-201ENST00000624324 3103 ntBASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 YBX1P5-201ENST00000509441 847 ntBASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA9Q9Y5G4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 CRYGEP-201ENST00000412192 528 ntBASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 DUTP2-201ENST00000519164 463 ntBASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 AC009053.2-201ENST00000563701 2365 ntBASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA9Q9Y5G4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms