Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.48■□□□□ 0.71
TRIM17Q9Y577 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 MIR1909-201ENST00000411312 80 ntBASIC19.48■□□□□ 0.71
TRIM17Q9Y577 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.48■□□□□ 0.71
TRIM17Q9Y577 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 AC107918.2-201ENST00000530817 355 ntBASIC19.48■□□□□ 0.71
TRIM17Q9Y577 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
TRIM17Q9Y577 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM17Q9Y577 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM17Q9Y577 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM17Q9Y577 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM17Q9Y577 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM17Q9Y577 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM17Q9Y577 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM17Q9Y577 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.47■□□□□ 0.71
TRIM17Q9Y577 HMGA1P7-201ENST00000406908 502 ntBASIC19.47■□□□□ 0.71
TRIM17Q9Y577 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.47■□□□□ 0.71
TRIM17Q9Y577 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM17Q9Y577 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM17Q9Y577 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM17Q9Y577 AL132655.2-201ENST00000596276 594 ntBASIC19.47■□□□□ 0.71
TRIM17Q9Y577 AL009183.1-201ENST00000603760 355 ntBASIC19.47■□□□□ 0.71
TRIM17Q9Y577 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM17Q9Y577 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM17Q9Y577 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM17Q9Y577 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
TRIM17Q9Y577 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
TRIM17Q9Y577 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM17Q9Y577 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM17Q9Y577 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM17Q9Y577 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM17Q9Y577 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM17Q9Y577 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRIM17Q9Y577 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM17Q9Y577 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM17Q9Y577 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM17Q9Y577 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM17Q9Y577 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM17Q9Y577 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.46■□□□□ 0.71
TRIM17Q9Y577 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.46■□□□□ 0.71
TRIM17Q9Y577 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM17Q9Y577 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM17Q9Y577 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TRIM17Q9Y577 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM17Q9Y577 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM17Q9Y577 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 AP000842.3-202ENST00000569238 1080 ntBASIC19.45■□□□□ 0.7
TRIM17Q9Y577 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.45■□□□□ 0.7
TRIM17Q9Y577 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TRIM17Q9Y577 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms