Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHTOPQ9Y3Y2 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHTOPQ9Y3Y2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CHTOPQ9Y3Y2 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHTOPQ9Y3Y2 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
CHTOPQ9Y3Y2 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CHTOPQ9Y3Y2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.52□□□□□ -0.4
CHTOPQ9Y3Y2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHTOPQ9Y3Y2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHTOPQ9Y3Y2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.52□□□□□ -0.4
CHTOPQ9Y3Y2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
CHTOPQ9Y3Y2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHTOPQ9Y3Y2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHTOPQ9Y3Y2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC12.52□□□□□ -0.4
CHTOPQ9Y3Y2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHTOPQ9Y3Y2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHTOPQ9Y3Y2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHTOPQ9Y3Y2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CHTOPQ9Y3Y2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 MIR564-202ENST00000385049 94 ntBASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 AC092368.3-202ENST00000574180 1591 ntBASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHTOPQ9Y3Y2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 AC034236.2-201ENST00000606662 1610 ntBASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 MIR149-201ENST00000384879 89 ntBASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC12.51□□□□□ -0.41
CHTOPQ9Y3Y2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms