Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 PKD1P5-201ENST00000532415 10291 ntBASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 AC103702.1-201ENST00000548801 2630 ntBASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB4Q9UN71 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGB4Q9UN71 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGB4Q9UN71 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGB4Q9UN71 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.89■□□□□ 0.3
PCDHGB4Q9UN71 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGB4Q9UN71 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGB4Q9UN71 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGB4Q9UN71 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGB4Q9UN71 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGB4Q9UN71 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 FAM8A6P-201ENST00000407496 1135 ntBASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 AC087499.1-201ENST00000418141 1075 ntBASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 SLC25A3P1-201ENST00000443844 931 ntBASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 RASA4DP-201ENST00000460726 1199 ntBASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 AL023973.1-201ENST00000624619 620 ntBASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 HYMAI-201ENST00000635591 3347 ntBASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 AL138688.1-201ENST00000624851 1594 ntBASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGB4Q9UN71 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms