Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 FAM21FP-201ENST00000426241 1131 ntBASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 AL353705.2-201ENST00000428243 662 ntBASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 CALR4P-201ENST00000431943 946 ntBASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 AC114501.2-201ENST00000439631 535 ntBASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 MIR4706-201ENST00000582134 82 ntBASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 AC073389.1-201ENST00000595595 795 ntBASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 RN7SL828P-201ENST00000607615 303 ntBASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RIMBP3Q9UFD9 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
RIMBP3Q9UFD9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC27.14■■□□□ 1.94
RIMBP3Q9UFD9 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
RIMBP3Q9UFD9 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
RIMBP3Q9UFD9 AC006033.1-201ENST00000440505 426 ntBASIC27.14■■□□□ 1.94
RIMBP3Q9UFD9 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.94
RIMBP3Q9UFD9 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
RIMBP3Q9UFD9 TPRX2P-201ENST00000535362 881 ntBASIC27.14■■□□□ 1.94
RIMBP3Q9UFD9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC27.14■■□□□ 1.94
RIMBP3Q9UFD9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
RIMBP3Q9UFD9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC27.14■■□□□ 1.93
RIMBP3Q9UFD9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC27.14■■□□□ 1.93
RIMBP3Q9UFD9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.93
RIMBP3Q9UFD9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RIMBP3Q9UFD9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RIMBP3Q9UFD9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC27.13■■□□□ 1.93
RIMBP3Q9UFD9 AC112907.3-201ENST00000577781 2400 ntBASIC27.13■■□□□ 1.93
RIMBP3Q9UFD9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RIMBP3Q9UFD9 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC27.13■■□□□ 1.93
RIMBP3Q9UFD9 KLF2P4-201ENST00000451959 1225 ntBASIC27.13■■□□□ 1.93
RIMBP3Q9UFD9 MTRF1LP2-201ENST00000506027 1122 ntBASIC27.13■■□□□ 1.93
RIMBP3Q9UFD9 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC27.13■■□□□ 1.93
RIMBP3Q9UFD9 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RIMBP3Q9UFD9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RIMBP3Q9UFD9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RIMBP3Q9UFD9 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
RIMBP3Q9UFD9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC27.13■■□□□ 1.93
RIMBP3Q9UFD9 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RIMBP3Q9UFD9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 AL365330.1-201ENST00000607459 531 ntBASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 RIT1-205ENST00000539040 919 ntTSL 2 BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 AL079307.3-201ENST00000556114 283 ntBASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 AC044860.1-202ENST00000559481 777 ntBASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 SRD5A3P1-201ENST00000603021 949 ntBASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 AL118558.3-201ENST00000607414 1079 ntBASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC27.12■■□□□ 1.93
RIMBP3Q9UFD9 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC27.11■■□□□ 1.93
RIMBP3Q9UFD9 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
RIMBP3Q9UFD9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC27.11■■□□□ 1.93
RIMBP3Q9UFD9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
RIMBP3Q9UFD9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC27.11■■□□□ 1.93
RIMBP3Q9UFD9 AL135999.2-201ENST00000622438 1686 ntBASIC27.11■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms