Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 PCDHB19P-201ENST00000570871 2371 ntBASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 FAM8A6P-201ENST00000407496 1135 ntBASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 LINC01023-201ENST00000606054 436 ntBASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 AC141257.4-201ENST00000634557 245 ntBASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 AC136944.6-201ENST00000634818 245 ntBASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PCDHB16Q9NRJ7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 AC008741.2-201ENST00000612792 3115 ntBASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 AC009154.2-201ENST00000621177 724 ntBASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms