Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 HYMAI-201ENST00000635591 3347 ntBASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 AC092666.2-201ENST00000613287 246 ntBASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 AL596257.1-201ENST00000641463 2694 ntBASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 AC016396.2-201ENST00000562575 1417 ntBASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
SND1-IT1Q9HBX3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SND1-IT1Q9HBX3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms