Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 AC012640.2-201ENST00000561606 901 ntBASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 AL589182.2-201ENST00000619332 1049 ntBASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 AC008735.5-201ENST00000623544 497 ntBASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 AC090340.1-201ENST00000620778 4980 ntBASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP6V0A4Q9HBG4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 MIR1233-2-201ENST00000408138 82 ntBASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 MIR1233-1-201ENST00000408722 82 ntBASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 BX842568.4-201ENST00000421222 227 ntBASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 AC027601.4-201ENST00000611259 610 ntBASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 NCF1C-201ENST00000438382 1427 ntBASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP6V0A4Q9HBG4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 LYSMD4-203ENST00000378904 2122 ntBASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 AC105339.3-201ENST00000560043 636 ntBASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ATP6V0A4Q9HBG4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATP6V0A4Q9HBG4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP6V0A4Q9HBG4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ATP6V0A4Q9HBG4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATP6V0A4Q9HBG4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP6V0A4Q9HBG4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP6V0A4Q9HBG4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms