Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.19■□□□□ 0.82
EFCC1Q9HA90 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.19■□□□□ 0.82
EFCC1Q9HA90 RHOQP3-201ENST00000437982 621 ntBASIC20.19■□□□□ 0.82
EFCC1Q9HA90 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.19■□□□□ 0.82
EFCC1Q9HA90 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.19■□□□□ 0.82
EFCC1Q9HA90 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.19■□□□□ 0.82
EFCC1Q9HA90 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.19■□□□□ 0.82
EFCC1Q9HA90 AC012645.4-201ENST00000610691 1061 ntBASIC20.19■□□□□ 0.82
EFCC1Q9HA90 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.19■□□□□ 0.82
EFCC1Q9HA90 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.19■□□□□ 0.82
EFCC1Q9HA90 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.19■□□□□ 0.82
EFCC1Q9HA90 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFCC1Q9HA90 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFCC1Q9HA90 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFCC1Q9HA90 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 AC023141.5-201ENST00000458585 616 ntBASIC20.18■□□□□ 0.82
EFCC1Q9HA90 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 AC093520.2-201ENST00000561830 333 ntBASIC20.18■□□□□ 0.82
EFCC1Q9HA90 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 AC092902.6-201ENST00000641783 218 ntBASIC20.18■□□□□ 0.82
EFCC1Q9HA90 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EFCC1Q9HA90 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 AL390961.4-201ENST00000623958 2535 ntBASIC20.17■□□□□ 0.82
EFCC1Q9HA90 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 AC093214.1-201ENST00000511688 1107 ntBASIC20.17■□□□□ 0.82
EFCC1Q9HA90 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 AC007064.4-201ENST00000637740 555 ntBASIC20.17■□□□□ 0.82
EFCC1Q9HA90 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFCC1Q9HA90 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 INGX-202ENST00000489074 768 ntBASIC20.16■□□□□ 0.82
EFCC1Q9HA90 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 AL390955.2-201ENST00000603032 514 ntBASIC20.16■□□□□ 0.82
EFCC1Q9HA90 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
EFCC1Q9HA90 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms