Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
THUMPD3Q9BV44 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 TSPY12P-201ENST00000421279 868 ntBASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 TSPY5P-201ENST00000426936 936 ntBASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 AC104076.2-201ENST00000448912 469 ntBASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 AC112698.1-201ENST00000510299 916 ntBASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
THUMPD3Q9BV44 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
THUMPD3Q9BV44 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 LINC01311-201ENST00000565162 1445 ntBASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 RNF152P1-201ENST00000397754 604 ntBASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 RCN1P1-201ENST00000400413 996 ntBASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 RN7SL850P-201ENST00000579959 291 ntBASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 AC004263.2-201ENST00000617183 678 ntBASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 AC018695.7-201ENST00000624587 2492 ntBASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
THUMPD3Q9BV44 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.63■□□□□ 0.25
THUMPD3Q9BV44 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms