Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 OR6D1P-203ENST00000641209 4860 ntBASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 AC132008.2-207ENST00000454517 770 ntBASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 REXO1L6P-202ENST00000619970 1078 ntBASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 KRT8P10-201ENST00000450021 1447 ntBASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCGF1Q9BSM1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 AC012317.2-201ENST00000623305 2251 ntBASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 AKR1C7P-201ENST00000305623 895 ntBASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 AL121912.1-201ENST00000603683 238 ntBASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 AC046158.3-201ENST00000624947 2558 ntBASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PCGF1Q9BSM1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 AL160237.2-201ENST00000556165 472 ntBASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
PCGF1Q9BSM1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms