Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARID3AQ99856 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.84■□□□□ 0.77
ARID3AQ99856 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.84■□□□□ 0.77
ARID3AQ99856 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.84■□□□□ 0.77
ARID3AQ99856 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ARID3AQ99856 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ARID3AQ99856 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARID3AQ99856 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ARID3AQ99856 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARID3AQ99856 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARID3AQ99856 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ARID3AQ99856 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.84■□□□□ 0.77
ARID3AQ99856 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.84■□□□□ 0.77
ARID3AQ99856 AL137013.1-201ENST00000432946 1228 ntBASIC19.84■□□□□ 0.77
ARID3AQ99856 FAM210CP-201ENST00000445714 574 ntBASIC19.84■□□□□ 0.77
ARID3AQ99856 SEC1P-202ENST00000473944 940 ntBASIC19.84■□□□□ 0.77
ARID3AQ99856 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.84■□□□□ 0.77
ARID3AQ99856 AC010331.1-201ENST00000611423 582 ntBASIC19.84■□□□□ 0.77
ARID3AQ99856 AL023973.1-201ENST00000624619 620 ntBASIC19.84■□□□□ 0.77
ARID3AQ99856 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ARID3AQ99856 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARID3AQ99856 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARID3AQ99856 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARID3AQ99856 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ARID3AQ99856 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.84■□□□□ 0.77
ARID3AQ99856 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.84■□□□□ 0.77
ARID3AQ99856 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARID3AQ99856 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARID3AQ99856 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ARID3AQ99856 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ARID3AQ99856 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ARID3AQ99856 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ARID3AQ99856 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ARID3AQ99856 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ARID3AQ99856 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ARID3AQ99856 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ARID3AQ99856 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ARID3AQ99856 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.83■□□□□ 0.77
ARID3AQ99856 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ARID3AQ99856 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ARID3AQ99856 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ARID3AQ99856 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
ARID3AQ99856 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ARID3AQ99856 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ARID3AQ99856 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ARID3AQ99856 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
ARID3AQ99856 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
ARID3AQ99856 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ARID3AQ99856 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.83■□□□□ 0.77
ARID3AQ99856 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.83■□□□□ 0.77
ARID3AQ99856 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ARID3AQ99856 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.83■□□□□ 0.77
ARID3AQ99856 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.83■□□□□ 0.76
ARID3AQ99856 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ARID3AQ99856 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ARID3AQ99856 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARID3AQ99856 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.83■□□□□ 0.76
ARID3AQ99856 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARID3AQ99856 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARID3AQ99856 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARID3AQ99856 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.83■□□□□ 0.76
ARID3AQ99856 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.83■□□□□ 0.76
ARID3AQ99856 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
ARID3AQ99856 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.83■□□□□ 0.76
ARID3AQ99856 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ARID3AQ99856 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ARID3AQ99856 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.82■□□□□ 0.76
ARID3AQ99856 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ARID3AQ99856 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.82■□□□□ 0.76
ARID3AQ99856 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.82■□□□□ 0.76
ARID3AQ99856 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ARID3AQ99856 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.82■□□□□ 0.76
ARID3AQ99856 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 RCN1P1-201ENST00000400413 996 ntBASIC19.82■□□□□ 0.76
ARID3AQ99856 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.82■□□□□ 0.76
ARID3AQ99856 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 LIN28AP1-201ENST00000429574 405 ntBASIC19.82■□□□□ 0.76
ARID3AQ99856 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.82■□□□□ 0.76
ARID3AQ99856 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 ATP5G1P1-201ENST00000448724 379 ntBASIC19.82■□□□□ 0.76
ARID3AQ99856 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.82■□□□□ 0.76
ARID3AQ99856 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.82■□□□□ 0.76
ARID3AQ99856 AL512604.3-201ENST00000569583 964 ntBASIC19.82■□□□□ 0.76
ARID3AQ99856 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ARID3AQ99856 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.82■□□□□ 0.76
ARID3AQ99856 MYC-208ENST00000641036 567 ntBASIC19.82■□□□□ 0.76
ARID3AQ99856 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.82■□□□□ 0.76
ARID3AQ99856 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms