Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 KRT8P48-201ENST00000515599 1220 ntBASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 MIR3909-201ENST00000579518 119 ntBASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CDK5RAP2Q96SN8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 AC112191.1-201ENST00000523689 701 ntBASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 AL139400.1-201ENST00000366220 510 ntBASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 AC109322.1-201ENST00000524499 1264 ntBASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.22■□□□□ 0.83
CDK5RAP2Q96SN8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDK5RAP2Q96SN8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK5RAP2Q96SN8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK5RAP2Q96SN8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDK5RAP2Q96SN8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CDK5RAP2Q96SN8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.21■□□□□ 0.83
CDK5RAP2Q96SN8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.21■□□□□ 0.83
CDK5RAP2Q96SN8 GNAS-203ENST00000306120 1878 ntBASIC20.21■□□□□ 0.83
CDK5RAP2Q96SN8 CROCCP2-202ENST00000412962 2773 ntBASIC20.21■□□□□ 0.83
CDK5RAP2Q96SN8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDK5RAP2Q96SN8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDK5RAP2Q96SN8 AL627223.1-201ENST00000416693 442 ntBASIC20.21■□□□□ 0.83
CDK5RAP2Q96SN8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.21■□□□□ 0.83
CDK5RAP2Q96SN8 AC074386.1-202ENST00000463561 864 ntBASIC20.21■□□□□ 0.83
CDK5RAP2Q96SN8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDK5RAP2Q96SN8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDK5RAP2Q96SN8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CDK5RAP2Q96SN8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.21■□□□□ 0.83
CDK5RAP2Q96SN8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 AL031055.1-201ENST00000606362 631 ntBASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDK5RAP2Q96SN8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms