Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.13□□□□□ -0.15
RAB40CQ96S21 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 REXO1L10P-201ENST00000615707 1290 ntBASIC14.13□□□□□ -0.15
RAB40CQ96S21 REXO1L12P-201ENST00000622156 912 ntBASIC14.13□□□□□ -0.15
RAB40CQ96S21 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 AC006449.5-201ENST00000610658 2098 ntBASIC14.13□□□□□ -0.15
RAB40CQ96S21 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB40CQ96S21 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.13□□□□□ -0.15
RAB40CQ96S21 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 TSPY7P-201ENST00000431358 1114 ntBASIC14.12□□□□□ -0.15
RAB40CQ96S21 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 AP003071.4-201ENST00000562276 1284 ntBASIC14.12□□□□□ -0.15
RAB40CQ96S21 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 MIR3917-201ENST00000580971 93 ntBASIC14.12□□□□□ -0.15
RAB40CQ96S21 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 MIR4785-201ENST00000585005 73 ntBASIC14.12□□□□□ -0.15
RAB40CQ96S21 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 AC116562.4-202ENST00000641738 218 ntBASIC14.12□□□□□ -0.15
RAB40CQ96S21 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 KRT17P2-201ENST00000300992 1314 ntBASIC14.12□□□□□ -0.15
RAB40CQ96S21 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.12□□□□□ -0.15
RAB40CQ96S21 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB40CQ96S21 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.11□□□□□ -0.15
RAB40CQ96S21 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40CQ96S21 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40CQ96S21 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40CQ96S21 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40CQ96S21 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40CQ96S21 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40CQ96S21 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RAB40CQ96S21 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB40CQ96S21 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms