Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SYNGAP1Q96PV0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.71■□□□□ 0.74
SYNGAP1Q96PV0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 AL133373.2-201ENST00000623187 2828 ntBASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 ACTG1P4-201ENST00000425123 1122 ntBASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 ACTG1P14-201ENST00000446382 1122 ntBASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.7■□□□□ 0.74
SYNGAP1Q96PV0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 AC138932.1-201ENST00000534164 6830 ntBASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 AL031432.2-201ENST00000566714 459 ntBASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 AL928711.1-201ENST00000570165 459 ntBASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 AP002472.1-201ENST00000577490 586 ntBASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.69■□□□□ 0.74
SYNGAP1Q96PV0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 HLA-J-202ENST00000469281 1241 ntBASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 AC007064.4-201ENST00000637740 555 ntBASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNGAP1Q96PV0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYNGAP1Q96PV0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms