Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 LINC00982-205ENST00000420957 435 ntBASIC14.44□□□□□ -0.1
GAFA1Q96PS6 ACTG1P4-201ENST00000425123 1122 ntBASIC14.44□□□□□ -0.1
GAFA1Q96PS6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 AC021087.4-201ENST00000563761 564 ntBASIC14.44□□□□□ -0.1
GAFA1Q96PS6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 AC025062.2-201ENST00000605477 670 ntBASIC14.44□□□□□ -0.1
GAFA1Q96PS6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 AC108860.2-201ENST00000562760 2183 ntBASIC14.44□□□□□ -0.1
GAFA1Q96PS6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
GAFA1Q96PS6 AC093525.9-201ENST00000624961 1746 ntBASIC14.44□□□□□ -0.1
GAFA1Q96PS6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 AC073648.2-201ENST00000510116 352 ntBASIC14.43□□□□□ -0.1
GAFA1Q96PS6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 AC064862.7-201ENST00000604520 867 ntBASIC14.43□□□□□ -0.1
GAFA1Q96PS6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GAFA1Q96PS6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GAFA1Q96PS6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms