Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 AC092053.1-201ENST00000605787 1936 ntBASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDLIM5Q96HC4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 NUS1P1-201ENST00000446295 882 ntBASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDLIM5Q96HC4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PDLIM5Q96HC4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
PDLIM5Q96HC4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PDLIM5Q96HC4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PDLIM5Q96HC4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PDLIM5Q96HC4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
PDLIM5Q96HC4 AC079776.2-201ENST00000641154 1609 ntBASIC16.96■□□□□ 0.3
PDLIM5Q96HC4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.96■□□□□ 0.3
PDLIM5Q96HC4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PDLIM5Q96HC4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PDLIM5Q96HC4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PDLIM5Q96HC4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PDLIM5Q96HC4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 GPR89P-201ENST00000407924 1495 ntBASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 AC106820.2-201ENST00000563775 3264 ntBASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 PRYP5-201ENST00000451909 266 ntBASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 AC148477.5-201ENST00000625164 1645 ntBASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 AP005117.1-201ENST00000584346 1413 ntBASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDLIM5Q96HC4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 AC093458.2-201ENST00000623150 629 ntBASIC16.94■□□□□ 0.3
PDLIM5Q96HC4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms