Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
APH1AQ96BI3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APH1AQ96BI3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APH1AQ96BI3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
APH1AQ96BI3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
APH1AQ96BI3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.42■□□□□ 0.06
APH1AQ96BI3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 LYSMD4-203ENST00000378904 2122 ntBASIC15.41■□□□□ 0.06
APH1AQ96BI3 AC004817.3-201ENST00000602957 2129 ntBASIC15.41■□□□□ 0.06
APH1AQ96BI3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.41■□□□□ 0.06
APH1AQ96BI3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
APH1AQ96BI3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.41■□□□□ 0.06
APH1AQ96BI3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
APH1AQ96BI3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
APH1AQ96BI3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.41■□□□□ 0.06
APH1AQ96BI3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.41■□□□□ 0.06
APH1AQ96BI3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.41■□□□□ 0.06
APH1AQ96BI3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.41■□□□□ 0.06
APH1AQ96BI3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.41■□□□□ 0.06
APH1AQ96BI3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.41■□□□□ 0.06
APH1AQ96BI3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
APH1AQ96BI3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.41■□□□□ 0.06
APH1AQ96BI3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
APH1AQ96BI3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.41■□□□□ 0.06
APH1AQ96BI3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
APH1AQ96BI3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.41■□□□□ 0.06
APH1AQ96BI3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APH1AQ96BI3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
APH1AQ96BI3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
APH1AQ96BI3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
APH1AQ96BI3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
APH1AQ96BI3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
APH1AQ96BI3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 MRPL3P1-201ENST00000400109 1033 ntBASIC15.4■□□□□ 0.06
APH1AQ96BI3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 AC018712.1-201ENST00000455767 687 ntBASIC15.4■□□□□ 0.06
APH1AQ96BI3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 AC093909.1-201ENST00000504731 1122 ntBASIC15.4■□□□□ 0.06
APH1AQ96BI3 OR7E14P-202ENST00000530490 1290 ntBASIC15.4■□□□□ 0.06
APH1AQ96BI3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 SLC25A6P4-201ENST00000586535 553 ntBASIC15.4■□□□□ 0.06
APH1AQ96BI3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 AC025062.2-201ENST00000605477 670 ntBASIC15.4■□□□□ 0.06
APH1AQ96BI3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
APH1AQ96BI3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
APH1AQ96BI3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
APH1AQ96BI3 AC067852.2-201ENST00000590513 2313 ntBASIC15.4■□□□□ 0.06
APH1AQ96BI3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
APH1AQ96BI3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
APH1AQ96BI3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
APH1AQ96BI3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
APH1AQ96BI3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
APH1AQ96BI3 FZD10-202ENST00000539839 3282 ntBASIC15.39■□□□□ 0.05
APH1AQ96BI3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
APH1AQ96BI3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
APH1AQ96BI3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
APH1AQ96BI3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
APH1AQ96BI3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
APH1AQ96BI3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
APH1AQ96BI3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms