Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 AL590627.1-203ENST00000421194 1026 ntBASIC17.25■□□□□ 0.35
SCAMP4Q969E2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 AC092910.1-201ENST00000482027 1129 ntBASIC17.25■□□□□ 0.35
SCAMP4Q969E2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 AC105339.3-201ENST00000560043 636 ntBASIC17.25■□□□□ 0.35
SCAMP4Q969E2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 AC004706.3-202ENST00000621574 984 ntBASIC17.25■□□□□ 0.35
SCAMP4Q969E2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCAMP4Q969E2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 IL9RP2-201ENST00000423948 1312 ntBASIC17.24■□□□□ 0.35
SCAMP4Q969E2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 AC006504.4-201ENST00000592118 1568 ntBASIC17.24■□□□□ 0.35
SCAMP4Q969E2 AL138688.1-201ENST00000624851 1594 ntBASIC17.24■□□□□ 0.35
SCAMP4Q969E2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 KRT18P27-201ENST00000427733 1299 ntBASIC17.24■□□□□ 0.35
SCAMP4Q969E2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 AC006557.2-201ENST00000592985 1240 ntBASIC17.24■□□□□ 0.35
SCAMP4Q969E2 AC120114.3-201ENST00000611923 658 ntBASIC17.24■□□□□ 0.35
SCAMP4Q969E2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.24■□□□□ 0.35
SCAMP4Q969E2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCAMP4Q969E2 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 AC073621.1-201ENST00000392730 636 ntBASIC17.23■□□□□ 0.35
SCAMP4Q969E2 ELK2BP-201ENST00000415014 1224 ntBASIC17.23■□□□□ 0.35
SCAMP4Q969E2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 BX640515.1-201ENST00000617215 977 ntBASIC17.23■□□□□ 0.35
SCAMP4Q969E2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCAMP4Q969E2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAMP4Q969E2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms