Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF4Q92544 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TM9SF4Q92544 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
TM9SF4Q92544 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF4Q92544 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF4Q92544 AC084018.2-201ENST00000613093 2607 ntBASIC16.44■□□□□ 0.22
TM9SF4Q92544 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF4Q92544 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
TM9SF4Q92544 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF4Q92544 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF4Q92544 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF4Q92544 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.44■□□□□ 0.22
TM9SF4Q92544 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF4Q92544 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.44■□□□□ 0.22
TM9SF4Q92544 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.44■□□□□ 0.22
TM9SF4Q92544 AL591424.1-201ENST00000442569 1213 ntBASIC16.44■□□□□ 0.22
TM9SF4Q92544 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.44■□□□□ 0.22
TM9SF4Q92544 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF4Q92544 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.44■□□□□ 0.22
TM9SF4Q92544 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.44■□□□□ 0.22
TM9SF4Q92544 AC021087.4-201ENST00000563761 564 ntBASIC16.44■□□□□ 0.22
TM9SF4Q92544 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.44■□□□□ 0.22
TM9SF4Q92544 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.44■□□□□ 0.22
TM9SF4Q92544 AL049840.3-201ENST00000602669 611 ntBASIC16.44■□□□□ 0.22
TM9SF4Q92544 AC027601.4-201ENST00000611259 610 ntBASIC16.44■□□□□ 0.22
TM9SF4Q92544 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.44■□□□□ 0.22
TM9SF4Q92544 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.44■□□□□ 0.22
TM9SF4Q92544 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.44■□□□□ 0.22
TM9SF4Q92544 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.44■□□□□ 0.22
TM9SF4Q92544 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF4Q92544 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.44■□□□□ 0.22
TM9SF4Q92544 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF4Q92544 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF4Q92544 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.43■□□□□ 0.22
TM9SF4Q92544 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.43■□□□□ 0.22
TM9SF4Q92544 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
TM9SF4Q92544 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TM9SF4Q92544 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TM9SF4Q92544 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TM9SF4Q92544 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TM9SF4Q92544 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.43■□□□□ 0.22
TM9SF4Q92544 HNRNPDP1-201ENST00000439535 754 ntBASIC16.43■□□□□ 0.22
TM9SF4Q92544 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.43■□□□□ 0.22
TM9SF4Q92544 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.43■□□□□ 0.22
TM9SF4Q92544 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.43■□□□□ 0.22
TM9SF4Q92544 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.43■□□□□ 0.22
TM9SF4Q92544 SART3-203ENST00000546611 1184 ntBASIC16.43■□□□□ 0.22
TM9SF4Q92544 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.43■□□□□ 0.22
TM9SF4Q92544 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.43■□□□□ 0.22
TM9SF4Q92544 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 AL096828.2-201ENST00000567259 1965 ntBASIC16.43■□□□□ 0.22
TM9SF4Q92544 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.43■□□□□ 0.22
TM9SF4Q92544 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.43■□□□□ 0.22
TM9SF4Q92544 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.43■□□□□ 0.22
TM9SF4Q92544 AC099343.3-201ENST00000605834 2503 ntBASIC16.43■□□□□ 0.22
TM9SF4Q92544 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF4Q92544 AC141586.5-201ENST00000624546 2050 ntBASIC16.42■□□□□ 0.22
TM9SF4Q92544 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TM9SF4Q92544 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 LINC01126-201ENST00000623515 1646 ntBASIC16.42■□□□□ 0.22
TM9SF4Q92544 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.42■□□□□ 0.22
TM9SF4Q92544 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 TNRC18P3-201ENST00000441896 2691 ntBASIC16.42■□□□□ 0.22
TM9SF4Q92544 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 RPS2P1-201ENST00000434010 821 ntBASIC16.42■□□□□ 0.22
TM9SF4Q92544 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.42■□□□□ 0.22
TM9SF4Q92544 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TM9SF4Q92544 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
TM9SF4Q92544 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.42■□□□□ 0.22
TM9SF4Q92544 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TM9SF4Q92544 AC145285.3-201ENST00000564603 959 ntBASIC16.42■□□□□ 0.22
TM9SF4Q92544 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.42■□□□□ 0.22
TM9SF4Q92544 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TM9SF4Q92544 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms