Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AL356309.3-201ENST00000624132 1934 ntBASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 BX088651.1-201ENST00000540551 451 ntBASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 REXO1L10P-201ENST00000615707 1290 ntBASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 REXO1L12P-201ENST00000622156 912 ntBASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 PAUPAR-201ENST00000630360 2965 ntBASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 HYMAI-201ENST00000635591 3347 ntBASIC17.29■□□□□ 0.36
CKAP2Q8WWK9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 AC128676.1-201ENST00000454392 318 ntBASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 AC002558.1-201ENST00000488906 803 ntBASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CKAP2Q8WWK9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CKAP2Q8WWK9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CKAP2Q8WWK9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CKAP2Q8WWK9 AL135905.2-201ENST00000584934 1404 ntBASIC17.27■□□□□ 0.35
CKAP2Q8WWK9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.27■□□□□ 0.35
CKAP2Q8WWK9 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CKAP2Q8WWK9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CKAP2Q8WWK9 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.27■□□□□ 0.35
CKAP2Q8WWK9 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CKAP2Q8WWK9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CKAP2Q8WWK9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CKAP2Q8WWK9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CKAP2Q8WWK9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.26■□□□□ 0.35
CKAP2Q8WWK9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms