Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 AC046185.3-201ENST00000623228 1824 ntBASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 EFTUD1P1-204ENST00000560401 1798 ntBASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 AC084346.2-201ENST00000607097 949 ntBASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 AC073592.3-201ENST00000625118 1834 ntBASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 AC132938.2-201ENST00000579188 680 ntBASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 AL591163.1-201ENST00000641757 987 ntBASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC11.54□□□□□ -0.56
ALMS1Q8TCU4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 AL844908.2-201ENST00000609461 460 ntBASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 MYCLP1-201ENST00000372451 1075 ntBASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 AL512638.1-201ENST00000457493 794 ntBASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 MIR4515-201ENST00000584082 81 ntBASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 HLA-V-204ENST00000476601 1289 ntBASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC11.53□□□□□ -0.56
ALMS1Q8TCU4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ALMS1Q8TCU4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC11.52□□□□□ -0.56
ALMS1Q8TCU4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
ALMS1Q8TCU4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
ALMS1Q8TCU4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.52□□□□□ -0.56
ALMS1Q8TCU4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ALMS1Q8TCU4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.52□□□□□ -0.56
ALMS1Q8TCU4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ALMS1Q8TCU4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.52□□□□□ -0.56
ALMS1Q8TCU4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms