Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 AL513480.1-201ENST00000451731 511 ntBASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 LINC00982-205ENST00000420957 435 ntBASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 AC119751.2-201ENST00000504529 210 ntBASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 API5-211ENST00000534695 560 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 AC093677.2-201ENST00000600169 1863 ntBASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CCDC168Q8NDH2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
CCDC168Q8NDH2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
CCDC168Q8NDH2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 PHGDH-209ENST00000641074 1780 ntBASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 ELK2AP-201ENST00000392510 1007 ntBASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 AL391825.1-201ENST00000457671 1364 ntBASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 BCYRN1-201ENST00000418539 200 ntBASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 AL645728.2-201ENST00000641974 660 ntBASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC168Q8NDH2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 AC087163.2-201ENST00000457299 853 ntBASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 ALG1L8P-201ENST00000533887 760 ntBASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CCDC168Q8NDH2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms