Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 RPS2P28-201ENST00000314255 741 ntBASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 AL031284.1-201ENST00000419297 478 ntBASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 PRYP5-201ENST00000451909 266 ntBASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 MTDHP4-201ENST00000600287 670 ntBASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 LINC01451-201ENST00000623792 534 ntBASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 AC148477.8-201ENST00000624298 468 ntBASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 AC006116.8-202ENST00000587620 1550 ntBASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 PCDHA12-202ENST00000613593 2588 ntBASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDH20Q8N6Y1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 BX005266.1-201ENST00000473402 457 ntBASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 RNA5SP419-201ENST00000515908 135 ntBASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 AC025062.2-201ENST00000605477 670 ntBASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH20Q8N6Y1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.77■□□□□ 0.43
PCDH20Q8N6Y1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH20Q8N6Y1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH20Q8N6Y1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH20Q8N6Y1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH20Q8N6Y1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.77■□□□□ 0.43
PCDH20Q8N6Y1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH20Q8N6Y1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
PCDH20Q8N6Y1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 REXO1L11P-201ENST00000620964 1927 ntBASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 STK19B-204ENST00000512515 211 ntBASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH20Q8N6Y1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms