Protein–RNA interactions for Protein: Q8N6N3

C1orf52, UPF0690 protein C1orf52, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf52Q8N6N3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 SLC25A1P3-201ENST00000395415 828 ntBASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 KRT17P6-201ENST00000453795 1220 ntBASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 STK25P1-201ENST00000585406 838 ntBASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 AL121761.2-201ENST00000598007 1648 ntBASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 AL353593.2-201ENST00000602529 1483 ntBASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 NSUN5P1-202ENST00000421140 1535 ntBASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 NSUN5P2-203ENST00000457352 1529 ntBASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 AC093525.9-201ENST00000624961 1746 ntBASIC16.65■□□□□ 0.26
C1orf52Q8N6N3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
C1orf52Q8N6N3 AC060834.1-201ENST00000443027 2032 ntBASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 AC096582.2-201ENST00000510860 516 ntBASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 AC074051.2-201ENST00000565115 352 ntBASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 MIR3180-1-201ENST00000580374 94 ntBASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 MIR3180-3-201ENST00000584616 94 ntBASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 BNIP3P18-201ENST00000593976 575 ntBASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
C1orf52Q8N6N3 AL445228.2-201ENST00000605589 952 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms