Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 FAM215A-202ENST00000632077 792 ntBASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 AC068880.1-201ENST00000507289 2297 ntBASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM48Q8IWZ4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TRIM48Q8IWZ4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TRIM48Q8IWZ4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM48Q8IWZ4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.08■□□□□ 0.33
TRIM48Q8IWZ4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TRIM48Q8IWZ4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM48Q8IWZ4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM48Q8IWZ4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM48Q8IWZ4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.08■□□□□ 0.33
TRIM48Q8IWZ4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.08■□□□□ 0.33
TRIM48Q8IWZ4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM48Q8IWZ4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.08■□□□□ 0.33
TRIM48Q8IWZ4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.08■□□□□ 0.33
TRIM48Q8IWZ4 HLA-J-201ENST00000462773 1622 ntBASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 MYCLP1-201ENST00000372451 1075 ntBASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 AC002558.1-201ENST00000488906 803 ntBASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 STK19B-204ENST00000512515 211 ntBASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 AC025062.2-201ENST00000605477 670 ntBASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 AC019129.2-201ENST00000609837 1235 ntBASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM48Q8IWZ4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TRIM48Q8IWZ4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms