Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
HERC6Q8IVU3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HERC6Q8IVU3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 AC020763.4-201ENST00000623414 4170 ntBASIC18.72■□□□□ 0.59
HERC6Q8IVU3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 AC100803.2-201ENST00000562459 1963 ntBASIC18.72■□□□□ 0.59
HERC6Q8IVU3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 AC026120.1-201ENST00000611536 926 ntBASIC18.72■□□□□ 0.59
HERC6Q8IVU3 ACTL9-202ENST00000612068 1252 ntBASIC18.72■□□□□ 0.59
HERC6Q8IVU3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 AL590787.1-201ENST00000568856 1315 ntBASIC18.72■□□□□ 0.59
HERC6Q8IVU3 AC063926.2-201ENST00000623766 1308 ntBASIC18.72■□□□□ 0.59
HERC6Q8IVU3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HERC6Q8IVU3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 AC002056.1-201ENST00000395613 760 ntBASIC18.71■□□□□ 0.59
HERC6Q8IVU3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HERC6Q8IVU3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms