Protein–RNA interactions for Protein: Q8IV35

WDR49, WD repeat-containing protein 49, humanhuman

Predictions only

Length 697 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR49Q8IV35 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WDR49Q8IV35 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WDR49Q8IV35 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WDR49Q8IV35 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
WDR49Q8IV35 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
WDR49Q8IV35 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.67■□□□□ 0.58
WDR49Q8IV35 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.67■□□□□ 0.58
WDR49Q8IV35 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WDR49Q8IV35 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.67■□□□□ 0.58
WDR49Q8IV35 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.67■□□□□ 0.58
WDR49Q8IV35 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WDR49Q8IV35 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
WDR49Q8IV35 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WDR49Q8IV35 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.67■□□□□ 0.58
WDR49Q8IV35 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
WDR49Q8IV35 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.67■□□□□ 0.58
WDR49Q8IV35 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.67■□□□□ 0.58
WDR49Q8IV35 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.67■□□□□ 0.58
WDR49Q8IV35 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
WDR49Q8IV35 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.67■□□□□ 0.58
WDR49Q8IV35 AP001005.1-201ENST00000571755 1248 ntBASIC18.67■□□□□ 0.58
WDR49Q8IV35 MIR7706-201ENST00000613747 67 ntBASIC18.67■□□□□ 0.58
WDR49Q8IV35 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.67■□□□□ 0.58
WDR49Q8IV35 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WDR49Q8IV35 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.67■□□□□ 0.58
WDR49Q8IV35 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
WDR49Q8IV35 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
WDR49Q8IV35 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
WDR49Q8IV35 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WDR49Q8IV35 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.67■□□□□ 0.58
WDR49Q8IV35 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
WDR49Q8IV35 LETM1P2-201ENST00000597330 2178 ntBASIC18.66■□□□□ 0.58
WDR49Q8IV35 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.66■□□□□ 0.58
WDR49Q8IV35 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR49Q8IV35 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR49Q8IV35 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR49Q8IV35 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR49Q8IV35 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR49Q8IV35 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR49Q8IV35 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.66■□□□□ 0.58
WDR49Q8IV35 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
WDR49Q8IV35 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
WDR49Q8IV35 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.66■□□□□ 0.58
WDR49Q8IV35 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
WDR49Q8IV35 HLA-A-201ENST00000376802 1334 ntBASIC18.66■□□□□ 0.58
WDR49Q8IV35 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
WDR49Q8IV35 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
WDR49Q8IV35 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR49Q8IV35 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
WDR49Q8IV35 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.66■□□□□ 0.58
WDR49Q8IV35 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR49Q8IV35 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR49Q8IV35 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.66■□□□□ 0.58
WDR49Q8IV35 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
WDR49Q8IV35 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.66■□□□□ 0.58
WDR49Q8IV35 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
WDR49Q8IV35 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
WDR49Q8IV35 AL645608.8-201ENST00000606034 2086 ntBASIC18.65■□□□□ 0.58
WDR49Q8IV35 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
WDR49Q8IV35 GPR89P-201ENST00000407924 1495 ntBASIC18.65■□□□□ 0.58
WDR49Q8IV35 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
WDR49Q8IV35 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.65■□□□□ 0.58
WDR49Q8IV35 EGFEM1P-202ENST00000431685 1563 ntBASIC18.65■□□□□ 0.58
WDR49Q8IV35 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
WDR49Q8IV35 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
WDR49Q8IV35 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
WDR49Q8IV35 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
WDR49Q8IV35 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
WDR49Q8IV35 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
WDR49Q8IV35 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
WDR49Q8IV35 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
WDR49Q8IV35 ELK2BP-201ENST00000415014 1224 ntBASIC18.65■□□□□ 0.58
WDR49Q8IV35 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.65■□□□□ 0.58
WDR49Q8IV35 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.65■□□□□ 0.58
WDR49Q8IV35 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.65■□□□□ 0.58
WDR49Q8IV35 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.65■□□□□ 0.58
WDR49Q8IV35 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.65■□□□□ 0.58
WDR49Q8IV35 AC012640.2-201ENST00000561606 901 ntBASIC18.65■□□□□ 0.58
WDR49Q8IV35 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.65■□□□□ 0.58
WDR49Q8IV35 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
WDR49Q8IV35 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.65■□□□□ 0.58
WDR49Q8IV35 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.65■□□□□ 0.58
WDR49Q8IV35 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.65■□□□□ 0.58
WDR49Q8IV35 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.65■□□□□ 0.58
WDR49Q8IV35 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
WDR49Q8IV35 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
WDR49Q8IV35 AL590787.1-201ENST00000568856 1315 ntBASIC18.65■□□□□ 0.58
WDR49Q8IV35 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.65■□□□□ 0.58
WDR49Q8IV35 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
WDR49Q8IV35 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.65■□□□□ 0.58
WDR49Q8IV35 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
WDR49Q8IV35 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
WDR49Q8IV35 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
WDR49Q8IV35 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
WDR49Q8IV35 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
WDR49Q8IV35 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.64■□□□□ 0.58
WDR49Q8IV35 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
WDR49Q8IV35 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
WDR49Q8IV35 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
WDR49Q8IV35 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms