Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL23A1Q86Y22 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
COL23A1Q86Y22 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
COL23A1Q86Y22 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
COL23A1Q86Y22 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 AC012569.1-201ENST00000591191 1524 ntBASIC21.57■■□□□ 1.04
COL23A1Q86Y22 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 AL606495.2-201ENST00000605867 535 ntBASIC21.57■■□□□ 1.04
COL23A1Q86Y22 SPDYE12P-201ENST00000618416 771 ntBASIC21.57■■□□□ 1.04
COL23A1Q86Y22 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
COL23A1Q86Y22 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 AC245100.3-201ENST00000441281 285 ntBASIC21.56■■□□□ 1.04
COL23A1Q86Y22 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC21.56■■□□□ 1.04
COL23A1Q86Y22 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL23A1Q86Y22 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL23A1Q86Y22 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL23A1Q86Y22 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL23A1Q86Y22 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL23A1Q86Y22 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC21.55■■□□□ 1.04
COL23A1Q86Y22 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC21.55■■□□□ 1.04
COL23A1Q86Y22 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.55■■□□□ 1.04
COL23A1Q86Y22 AC005412.3-201ENST00000580309 715 ntBASIC21.55■■□□□ 1.04
COL23A1Q86Y22 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC21.55■■□□□ 1.04
COL23A1Q86Y22 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC21.55■■□□□ 1.04
COL23A1Q86Y22 AL138828.2-201ENST00000615812 383 ntBASIC21.55■■□□□ 1.04
COL23A1Q86Y22 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL23A1Q86Y22 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
COL23A1Q86Y22 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL23A1Q86Y22 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL23A1Q86Y22 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.55■■□□□ 1.04
COL23A1Q86Y22 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL23A1Q86Y22 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.54■■□□□ 1.04
COL23A1Q86Y22 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL23A1Q86Y22 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL23A1Q86Y22 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL23A1Q86Y22 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL23A1Q86Y22 HNRNPA3P1-201ENST00000401429 1139 ntBASIC21.54■■□□□ 1.04
COL23A1Q86Y22 HNRNPA3P5-201ENST00000455201 833 ntBASIC21.54■■□□□ 1.04
COL23A1Q86Y22 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL23A1Q86Y22 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC21.54■■□□□ 1.04
COL23A1Q86Y22 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.54■■□□□ 1.04
COL23A1Q86Y22 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC21.54■■□□□ 1.04
COL23A1Q86Y22 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.54■■□□□ 1.04
COL23A1Q86Y22 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL23A1Q86Y22 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL23A1Q86Y22 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL23A1Q86Y22 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL23A1Q86Y22 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.54■■□□□ 1.04
COL23A1Q86Y22 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL23A1Q86Y22 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms