Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 AC008550.1-201ENST00000511500 884 ntBASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 NAPSB-206ENST00000562112 1266 ntBASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 AC026691.1-201ENST00000602502 2017 ntBASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 AC006449.5-201ENST00000610658 2098 ntBASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRTM1Q86UE6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 MIR718-201ENST00000390190 70 ntBASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 KRT18P48-201ENST00000434763 852 ntBASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 AL136038.4-201ENST00000603606 1261 ntBASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRTM1Q86UE6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 AC092068.3-201ENST00000587894 2016 ntBASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 AL596257.1-201ENST00000641463 2694 ntBASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRTM1Q86UE6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms