Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC21.69■■□□□ 1.06
RGPD4Q7Z3J3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC21.69■■□□□ 1.06
RGPD4Q7Z3J3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC21.69■■□□□ 1.06
RGPD4Q7Z3J3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RGPD4Q7Z3J3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RGPD4Q7Z3J3 SLC22A20-204ENST00000530038 1673 ntBASIC21.69■■□□□ 1.06
RGPD4Q7Z3J3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 HLA-H-201ENST00000383620 1096 ntBASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 AC011495.1-201ENST00000498085 584 ntBASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 FAM8A2P-201ENST00000528813 1142 ntBASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 AC003101.2-201ENST00000612557 442 ntBASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 COX11-210ENST00000639671 696 ntBASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RGPD4Q7Z3J3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 AC091167.2-201ENST00000579581 588 ntBASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 AC068587.10-201ENST00000641210 219 ntBASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RGPD4Q7Z3J3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 MIR4259-201ENST00000584466 101 ntBASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 AL353705.2-201ENST00000428243 662 ntBASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 RN7SL752P-201ENST00000463779 287 ntBASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 SPDYE18-201ENST00000510091 1050 ntBASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
RGPD4Q7Z3J3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
RGPD4Q7Z3J3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RGPD4Q7Z3J3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
RGPD4Q7Z3J3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RGPD4Q7Z3J3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.65■■□□□ 1.06
RGPD4Q7Z3J3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RGPD4Q7Z3J3 AC005332.7-201ENST00000614046 2005 ntBASIC21.65■■□□□ 1.06
RGPD4Q7Z3J3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.65■■□□□ 1.06
RGPD4Q7Z3J3 REXO1L6P-201ENST00000603433 1515 ntBASIC21.65■■□□□ 1.06
RGPD4Q7Z3J3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC21.65■■□□□ 1.06
RGPD4Q7Z3J3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC21.65■■□□□ 1.06
RGPD4Q7Z3J3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
RGPD4Q7Z3J3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC21.65■■□□□ 1.06
RGPD4Q7Z3J3 AC008735.3-201ENST00000596646 500 ntBASIC21.65■■□□□ 1.06
RGPD4Q7Z3J3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RGPD4Q7Z3J3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RGPD4Q7Z3J3 AC073130.3-201ENST00000624389 2278 ntBASIC21.65■■□□□ 1.06
RGPD4Q7Z3J3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC21.65■■□□□ 1.06
RGPD4Q7Z3J3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RGPD4Q7Z3J3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RGPD4Q7Z3J3 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.64■■□□□ 1.06
RGPD4Q7Z3J3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RGPD4Q7Z3J3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC21.64■■□□□ 1.06
RGPD4Q7Z3J3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RGPD4Q7Z3J3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
RGPD4Q7Z3J3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms