Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LYSMD3Q7Z3D4 AL139384.1-201ENST00000612143 3047 ntBASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 AL020989.1-201ENST00000422979 469 ntBASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 BX005266.1-201ENST00000473402 457 ntBASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 AC073592.4-201ENST00000623827 446 ntBASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 AL356309.3-201ENST00000624132 1934 ntBASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 SIGLEC16-201ENST00000599858 1437 ntBASIC17.47■□□□□ 0.39
LYSMD3Q7Z3D4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 AC079781.3-201ENST00000449110 356 ntBASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 SART3-203ENST00000546611 1184 ntBASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 NKAPP1-205ENST00000585790 367 ntBASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LYSMD3Q7Z3D4 CROCCP2-202ENST00000412962 2773 ntBASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms