Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
C11orf88Q6PI97 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 RCC2P3-201ENST00000418112 1537 ntBASIC15.22■□□□□ 0.03
C11orf88Q6PI97 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.22■□□□□ 0.03
C11orf88Q6PI97 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.22■□□□□ 0.03
C11orf88Q6PI97 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 AL355312.1-201ENST00000407115 2176 ntBASIC15.21■□□□□ 0.03
C11orf88Q6PI97 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 DUX4L26-201ENST00000489078 1255 ntBASIC15.21■□□□□ 0.03
C11orf88Q6PI97 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 CKBP1-201ENST00000565489 1086 ntBASIC15.21■□□□□ 0.03
C11orf88Q6PI97 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
C11orf88Q6PI97 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
C11orf88Q6PI97 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
C11orf88Q6PI97 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
C11orf88Q6PI97 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
C11orf88Q6PI97 PHGDH-209ENST00000641074 1780 ntBASIC15.21■□□□□ 0.02
C11orf88Q6PI97 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
C11orf88Q6PI97 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms