Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC27A1Q6PCB7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC27A1Q6PCB7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC27A1Q6PCB7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC27A1Q6PCB7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC27A1Q6PCB7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC27A1Q6PCB7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC27A1Q6PCB7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC27A1Q6PCB7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC27A1Q6PCB7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 AC002310.6-201ENST00000624451 1377 ntBASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 MIR1233-2-201ENST00000408138 82 ntBASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 MIR1233-1-201ENST00000408722 82 ntBASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 AC018845.2-201ENST00000568326 409 ntBASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC27A1Q6PCB7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 UPF3AP3-201ENST00000420996 769 ntBASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 AC010327.4-202ENST00000591484 748 ntBASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 MTDHP5-201ENST00000598980 586 ntBASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 AC010507.1-201ENST00000633895 436 ntBASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 AC007613.1-201ENST00000572811 2597 ntBASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC27A1Q6PCB7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 RPSAP43-201ENST00000402237 625 ntBASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 GPX1P2-201ENST00000429271 606 ntBASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 AC096734.2-201ENST00000562054 433 ntBASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC27A1Q6PCB7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms