Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LPCAT4Q643R3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 KRASP1-201ENST00000407852 552 ntBASIC16.41■□□□□ 0.22
LPCAT4Q643R3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 AC009065.1-201ENST00000564055 1225 ntBASIC16.41■□□□□ 0.22
LPCAT4Q643R3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LPCAT4Q643R3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 KRT8P7-201ENST00000533003 1432 ntBASIC16.4■□□□□ 0.22
LPCAT4Q643R3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 AL023875.1-201ENST00000640777 796 ntBASIC16.4■□□□□ 0.22
LPCAT4Q643R3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LPCAT4Q643R3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
LPCAT4Q643R3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LPCAT4Q643R3 AC126177.1-201ENST00000547829 2218 ntBASIC16.39■□□□□ 0.22
LPCAT4Q643R3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LPCAT4Q643R3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LPCAT4Q643R3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms