Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC084121.3-201ENST00000641716 218 ntBASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 AC105233.6-201ENST00000642093 218 ntBASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 AKAP8P1-201ENST00000434743 1349 ntBASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 AC005034.1-201ENST00000426657 489 ntBASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 KLF2P3-201ENST00000451977 1087 ntBASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 AC125807.1-201ENST00000483097 614 ntBASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 TERF1P3-201ENST00000505638 1227 ntBASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 AC243562.1-201ENST00000560672 389 ntBASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 AL161645.1-201ENST00000622716 1255 ntBASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
LYSMD4Q5XG99 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 AC015922.1-201ENST00000421102 1152 ntBASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 AC107890.1-201ENST00000422478 521 ntBASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 FAM58DP-201ENST00000428076 619 ntBASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 RBPMS2P1-201ENST00000437762 623 ntBASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 IGHV3-62-201ENST00000520057 340 ntBASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 AC107918.2-201ENST00000530817 355 ntBASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 AC087641.1-201ENST00000557561 1021 ntBASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 MIR4515-201ENST00000584082 81 ntBASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 AL035252.4-201ENST00000624174 288 ntBASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
LYSMD4Q5XG99 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms