Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 MYCLP1-201ENST00000372451 1075 ntBASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 AC005104.2-201ENST00000427818 678 ntBASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 AC079781.3-201ENST00000449110 356 ntBASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 IGHV3-52-201ENST00000519770 353 ntBASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 AC104692.2-201ENST00000603054 253 ntBASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 AC064862.7-201ENST00000604520 867 ntBASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 AC019129.2-201ENST00000609837 1235 ntBASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 AL049757.1-201ENST00000616842 1596 ntBASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TTC39BQ5VTQ0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 AC026396.1-201ENST00000419388 421 ntBASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 AP002469.2-201ENST00000531724 424 ntBASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 AL662844.1-201ENST00000546340 181 ntBASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 AL356309.3-201ENST00000624132 1934 ntBASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TTC39BQ5VTQ0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms