Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 AL805961.1-202ENST00000641562 540 ntBASIC15.24■□□□□ 0.03
FREM1Q5H8C1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 AL139327.4-201ENST00000612362 153 ntBASIC15.24■□□□□ 0.03
FREM1Q5H8C1 AL589182.2-201ENST00000619332 1049 ntBASIC15.24■□□□□ 0.03
FREM1Q5H8C1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
FREM1Q5H8C1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 GNAS-203ENST00000306120 1878 ntBASIC15.23■□□□□ 0.03
FREM1Q5H8C1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 AC141586.5-201ENST00000624546 2050 ntBASIC15.23■□□□□ 0.03
FREM1Q5H8C1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
FREM1Q5H8C1 AC104109.2-201ENST00000602919 1418 ntBASIC15.23■□□□□ 0.03
FREM1Q5H8C1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 CRYGEP-201ENST00000412192 528 ntBASIC15.22■□□□□ 0.03
FREM1Q5H8C1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 AC093909.1-201ENST00000504731 1122 ntBASIC15.22■□□□□ 0.03
FREM1Q5H8C1 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 KRT18P2-201ENST00000447938 1258 ntBASIC15.22■□□□□ 0.03
FREM1Q5H8C1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 AC010327.4-202ENST00000591484 748 ntBASIC15.22■□□□□ 0.03
FREM1Q5H8C1 AC010654.1-201ENST00000615722 808 ntBASIC15.22■□□□□ 0.03
FREM1Q5H8C1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FREM1Q5H8C1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms