Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHRFAM7AQ494W8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.27■□□□□ 0.03
CHRFAM7AQ494W8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.27■□□□□ 0.03
CHRFAM7AQ494W8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHRFAM7AQ494W8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CHRFAM7AQ494W8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHRFAM7AQ494W8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHRFAM7AQ494W8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
CHRFAM7AQ494W8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CHRFAM7AQ494W8 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.27■□□□□ 0.03
CHRFAM7AQ494W8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CHRFAM7AQ494W8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CHRFAM7AQ494W8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 AF228730.7-201ENST00000641842 219 ntBASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRFAM7AQ494W8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 Z83836.1-201ENST00000624605 1642 ntBASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 MIR1233-2-201ENST00000408138 82 ntBASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 MIR1233-1-201ENST00000408722 82 ntBASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 AC092865.5-201ENST00000545435 363 ntBASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 RNF126P1-202ENST00000569893 925 ntBASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 AP001005.1-201ENST00000571755 1248 ntBASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 AL671883.3-201ENST00000603274 991 ntBASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 LINC00167-201ENST00000530583 1419 ntBASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRFAM7AQ494W8 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CHRFAM7AQ494W8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms