Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 ACTG1P14-201ENST00000446382 1122 ntBASIC20.7■□□□□ 0.9
PDS5AQ29RF7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 MIR4469-201ENST00000583919 79 ntBASIC20.7■□□□□ 0.9
PDS5AQ29RF7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 AC068137.2-201ENST00000605408 478 ntBASIC20.7■□□□□ 0.9
PDS5AQ29RF7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDS5AQ29RF7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 AL078644.1-201ENST00000609881 752 ntBASIC20.69■□□□□ 0.9
PDS5AQ29RF7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDS5AQ29RF7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 NOC2LP2-201ENST00000407594 1944 ntBASIC20.68■□□□□ 0.9
PDS5AQ29RF7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 AL645728.2-201ENST00000641974 660 ntBASIC20.68■□□□□ 0.9
PDS5AQ29RF7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDS5AQ29RF7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 AC254562.1-201ENST00000417586 456 ntBASIC20.67■□□□□ 0.9
PDS5AQ29RF7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 DNAJB3-202ENST00000449667 1266 ntBASIC20.67■□□□□ 0.9
PDS5AQ29RF7 AL513480.1-201ENST00000451731 511 ntBASIC20.67■□□□□ 0.9
PDS5AQ29RF7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDS5AQ29RF7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.66■□□□□ 0.9
PDS5AQ29RF7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms