Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 MIR3180-3-201ENST00000584616 94 ntBASIC14.05□□□□□ -0.16
CX3CL1P78423 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.05□□□□□ -0.16
CX3CL1P78423 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.05□□□□□ -0.16
CX3CL1P78423 AL138831.2-201ENST00000606564 490 ntBASIC14.05□□□□□ -0.16
CX3CL1P78423 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CX3CL1P78423 AC092119.3-201ENST00000612618 583 ntBASIC14.05□□□□□ -0.16
CX3CL1P78423 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
CX3CL1P78423 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CX3CL1P78423 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.05□□□□□ -0.16
CX3CL1P78423 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CX3CL1P78423 AC022211.2-201ENST00000585075 2527 ntBASIC14.05□□□□□ -0.16
CX3CL1P78423 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.05□□□□□ -0.16
CX3CL1P78423 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CX3CL1P78423 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CX3CL1P78423 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.05□□□□□ -0.16
CX3CL1P78423 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CX3CL1P78423 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CX3CL1P78423 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.05□□□□□ -0.16
CX3CL1P78423 AC010460.3-201ENST00000511359 1579 ntBASIC14.05□□□□□ -0.16
CX3CL1P78423 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CX3CL1P78423 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.04□□□□□ -0.16
CX3CL1P78423 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.04□□□□□ -0.16
CX3CL1P78423 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CX3CL1P78423 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.04□□□□□ -0.16
CX3CL1P78423 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CX3CL1P78423 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.04□□□□□ -0.16
CX3CL1P78423 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.04□□□□□ -0.16
CX3CL1P78423 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CX3CL1P78423 REXO1L11P-201ENST00000620964 1927 ntBASIC14.04□□□□□ -0.16
CX3CL1P78423 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.04□□□□□ -0.16
CX3CL1P78423 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CX3CL1P78423 COX5BP2-201ENST00000392354 334 ntBASIC14.04□□□□□ -0.16
CX3CL1P78423 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CX3CL1P78423 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CX3CL1P78423 AC007967.3-201ENST00000434308 558 ntBASIC14.04□□□□□ -0.16
CX3CL1P78423 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.04□□□□□ -0.16
CX3CL1P78423 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.04□□□□□ -0.16
CX3CL1P78423 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.04□□□□□ -0.16
CX3CL1P78423 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CX3CL1P78423 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CX3CL1P78423 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.04□□□□□ -0.16
CX3CL1P78423 AP005901.3-202ENST00000581653 237 ntBASIC14.04□□□□□ -0.16
CX3CL1P78423 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CX3CL1P78423 AC092329.2-201ENST00000598402 547 ntBASIC14.04□□□□□ -0.16
CX3CL1P78423 LINC01451-201ENST00000623792 534 ntBASIC14.04□□□□□ -0.16
CX3CL1P78423 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CX3CL1P78423 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.04□□□□□ -0.16
CX3CL1P78423 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CX3CL1P78423 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CX3CL1P78423 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CX3CL1P78423 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CX3CL1P78423 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CX3CL1P78423 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CX3CL1P78423 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.04□□□□□ -0.16
CX3CL1P78423 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.04□□□□□ -0.16
CX3CL1P78423 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CX3CL1P78423 AC133963.1-201ENST00000504166 1679 ntBASIC14.04□□□□□ -0.16
CX3CL1P78423 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CX3CL1P78423 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CX3CL1P78423 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.04□□□□□ -0.16
CX3CL1P78423 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.04□□□□□ -0.16
CX3CL1P78423 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CX3CL1P78423 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.04□□□□□ -0.16
CX3CL1P78423 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.03□□□□□ -0.16
CX3CL1P78423 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CX3CL1P78423 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CL1P78423 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CX3CL1P78423 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CX3CL1P78423 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
CX3CL1P78423 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CL1P78423 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CL1P78423 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CL1P78423 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CL1P78423 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.03□□□□□ -0.16
CX3CL1P78423 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CL1P78423 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CL1P78423 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CX3CL1P78423 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CL1P78423 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CL1P78423 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CL1P78423 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CL1P78423 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CL1P78423 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CX3CL1P78423 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CL1P78423 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CX3CL1P78423 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.03□□□□□ -0.16
CX3CL1P78423 KRT17P6-201ENST00000453795 1220 ntBASIC14.03□□□□□ -0.16
CX3CL1P78423 MINOS1P3-201ENST00000457048 203 ntBASIC14.03□□□□□ -0.16
CX3CL1P78423 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.03□□□□□ -0.16
CX3CL1P78423 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.03□□□□□ -0.16
CX3CL1P78423 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.03□□□□□ -0.16
CX3CL1P78423 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.03□□□□□ -0.16
CX3CL1P78423 AP000867.3-201ENST00000524675 377 ntBASIC14.03□□□□□ -0.16
CX3CL1P78423 AC009533.2-201ENST00000543664 586 ntBASIC14.03□□□□□ -0.16
CX3CL1P78423 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.03□□□□□ -0.16
CX3CL1P78423 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.03□□□□□ -0.16
CX3CL1P78423 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CX3CL1P78423 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CX3CL1P78423 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.03□□□□□ -0.16
CX3CL1P78423 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms